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Reactome download API

Methods to download different views of a result

Reactome download API is one of 23 APIs that Reactome publishes on the APIs.io network, described by a machine-readable OpenAPI specification.

Tagged areas include download. The published artifact set on APIs.io includes an OpenAPI specification and API documentation.

This API exposes 5 operations across 5 paths, and defines 12 schemas. It is described by OpenAPI 3.0.1, at version 2.0.

Requests are made against a single base URL, /AnalysisService.

5 operations 5 paths 12 schemas 5 GET

Metadata

The identity and technical contract details declared by the specification.

Specification
OpenAPI 3.0.1
API Version
2.0
Base URL
https://reactome.org/ContentService
Contact
Terms of Service
Resource Areas
1

Paths & Operations 5

Across 5 paths, the API surfaces 5 operations — 5 GET. Each is listed below with its method, path, parameters, and response codes.

download 5

Methods to download different views of a result

GET
/download/{token}/entities/found/{resource}/{filename}.csv
Downloads found identifiers for a given analysis and resource
downloadMappingResult 3 params → 404410
GET
/download/{token}/entities/notfound/{filename}.csv
Downloads a list of the not found identifiers
downloadNotFound 2 params → 404410
GET
/download/{token}/pathways/{resource}/{filename}.csv
Downloads all hit pathways for a given analysis
downloadResultCSV 3 params → 404410
GET
/download/{token}/result.json
Returns the complete result in json format
downloadResultJSON 2 params → 404410
GET
/download/{token}/result.json.gz
Returns the complete result in json format (gzipped)
downloadResultGZIP 1 param → 404410

Schemas 12

The contract defines 12 schemas that model the data the API accepts and returns. The most detailed are ExternalStatistics (15 properties), ExternalAnalysisSummary (10 properties), ExternalPathwayNodeSummary (7 properties), ExternalAnalysisResult (5 properties). Each schema is shown below with its type and property counts.

ExternalStatistics
object
15 properties
ExternalAnalysisSummary
object
10 properties
ExternalPathwayNodeSummary
object
7 properties
ExternalMainIdentifier
object
2 properties
ExternalIdentifier
object
3 properties
ExternalPathwayNodeData
object
4 properties
ExternalInteraction
object
2 properties
ExternalAnalysisResult
object
5 properties
ExternalExpressionSummary
object
3 properties
ExternalAnalysisReaction
object
3 properties
ExternalInteractor
object
3 properties
ExternalSpeciesNode
object
3 properties

Specification

The full machine-readable OpenAPI contract behind this narrative.

Source

reactome-download-api-openapi.yml Raw ↑

Other APIs Reactome publishes across the network.

Reactome database API
Reactome discover API
Reactome diseases API
Reactome entities API
Reactome events API
Reactome exporter API
Reactome identifier API
Reactome identifiers API
Reactome import API
Reactome interactors API
Reactome mapping API
Reactome orthology API