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Benchling Registry API

Manage registry objects.See our documentation on [how to register entities](https://docs.benchling.com/docs/registering-entities).

Benchling Registry API is one of 203 APIs that Benchling publishes on the APIs.io network, described by a machine-readable OpenAPI specification.

Tagged areas include Registry. The published artifact set on APIs.io includes an OpenAPI specification, API documentation, an API reference, authentication docs, a changelog, and a status page.

This API exposes 14 operations across 14 paths, and defines 86 schemas. It is described by OpenAPI 3.2.0, at version 2.0.0.

Requests are made against 2 base URLs: /api/v2, /api/v3.

14 operations 14 paths 86 schemas 12 GET2 POST

Metadata

The identity and technical contract details declared by the specification.

Specification
OpenAPI 3.2.0
API Version
2.0.0
Base URL
https://{tenant}.benchling.com/api/v2
Authentication
HTTP Basic, HTTP Basic, OAuth 2.0
License
Resource Areas
1

Authentication & Security 3

Benchling Registry API declares 3 security schemes for authenticating requests. It accepts HTTP basic authentication (basicApiKeyAuth). It accepts HTTP basic authentication (basicClientIdSecretAuth). It supports OAuth 2.0 (oAuth) using the clientCredentials flow. By default, every request must be authenticated.

  • basicApiKeyAuth — Use issued API key for standard access to the API
  • basicClientIdSecretAuth — Auth used as part of client credentials OAuth flow prior to receiving a bearer token.
  • oAuth — OAuth2 Client Credentials flow intended for service access

Paths & Operations 14

Across 14 paths, the API surfaces 14 operations — 12 GET, 2 POST. Each is listed below with its method, path, parameters, and response codes.

Registry 14

Manage registry objects. See our documentation on how to register entities.

GET
/registries
List registries
listRegistries 2 params → 200
GET
/registries/{registry_id}
Get registry
getRegistry 1 param → 200404
GET
/registries/{registry_id}/batch-schemasdeprecated
List batch schemas by registry
listBatchSchemasByRegistry 1 param → 200400
GET
/registries/{registry_id}/box-schemasdeprecated
List box schemas by registry
listBoxSchemasByRegistry 1 param → 200400
GET
/registries/{registry_id}/container-schemasdeprecated
List container schemas by registry
listContainerSchemasByRegistry 1 param → 200400
GET
/registries/{registry_id}/dropdownsdeprecated
List dropdowns for a given registry
listDropdownsByRegistry 1 param → 200400
GET
/registries/{registry_id}/entity-schemasdeprecated
List entity schemas by registry
listEntitySchemasByRegistry 1 param → 200400
GET
/registries/{registry_id}/location-schemasdeprecated
List location schemas by registry
listLocationSchemasByRegistry 1 param → 200400
GET
/registries/{registry_id}/plate-schemasdeprecated
List plate schemas by registry
listPlateSchemasByRegistry 1 param → 200400
GET
/registries/{registry_id}/registered-entities:bulk-get
Bulk get registered entities
bulkGetRegisteredEntities 2 params → 200400404
POST
/registries/{registry_id}:bulk-register-entities
Register entities
registerEntities 1 param body → 202400
POST
/registries/{registry_id}:unregister-entities
Unregister entities
unregisterEntities 1 param body → 200400
GET
/registry/items
List Registry items
Registry.List 13 params → 200400403404429500
GET
/registry/{registry_id}
Get Registry by ID
Registry.Get 4 params → 200400403404429500

Schemas 86

The contract defines 86 schemas that model the data the API accepts and returns. The most detailed are RnaSequence (29 properties), DnaSequence (27 properties), AaSequence (21 properties), Mixture (21 properties). Each schema is shown below with its type and property counts.

ContainerSchema
BoxSchemasList
object
1 property
PlateSchemasList
object
1 property
Oligo
object
20 properties
BatchSchemasList
object
1 property
FloatFieldDefinition
PartySummary
object
3 properties
Mixture
object
21 properties
RegistrySchema
Organization
object
3 properties
Entity
object
CustomEntityWithEntityType
object
CustomField
object
1 property
Registry
object
4 properties
UserSummary
IngredientMeasurementUnits
stringnull
FieldType
string
IntegerFieldDefinition
RnaSequenceWithEntityType
object
MixtureWithEntityType
object
DnaAnnotation
DnaSequenceTranscription
object
4 properties
EntityLabels
object
3 properties
BaseError
object
3 properties
CustomFields
object
PlateSchema
RnaSequence
object
29 properties
NamingStrategy
string
Specifies the behavior for automatically generated names when registering an entity. - NEWIDS: Generate new registry IDs - IDSFROMNAMES: Generate registry IDs…
DropdownsRegistryList
object
1 property
DeprecatedEntitySchema
Field
object
5 properties 1 required
SchemaLinkFieldDefinition
Schema
object
5 properties
LocationSchema
AaSequenceWithEntityType
object
DropdownFieldDefinition
RegisterEntities
object
2 properties 2 required
DropdownSummary
object
2 properties
DnaSequenceWithEntityType
object
ContainerLabels
object
3 properties
DnaSequencePart
RnaOligoWithEntityType
object
RnaAnnotation
RegistrationOrigin
object
2 properties
RnaOligo
DnaOligo
SimpleFieldDefinition
DnaOligoWithEntityType
object
SequenceFeatureCustomField
object
A name and value pair associated with a sequence feature (annotation or translation). For genbank imports, these are the qualifiers associated with each featur…
2 properties
SequenceFeatureBase
object
4 properties
Fields
object
LocationSchemasList
object
1 property
AsyncTaskLink
object
1 property
Translation
CustomEntity
object
18 properties
SchemaSummary
object
2 properties
EmptyObject
object
RegistriesList
object
1 property
UnregisterEntities
object
2 properties 2 required
MoleculeWithEntityType
object
DnaSequence
object
27 properties
AaAnnotation
object
7 properties
MixtureMeasurementUnits
stringnull
NotFoundError
object
1 property
Molecule
object
19 properties
EntitySchema
BadRequestError
object
1 property
NameTemplatePart
object
4 properties
AaSequence
object
21 properties
RegisteredEntitiesList
object
1 property
RnaSequencePart
BoxSchema
Primer
object
9 properties
Ingredient
object
10 properties
NucleotideSequencePart
object
3 properties
DeprecatedEntitySchemasList
object
1 property
ArchiveRecord
object
1 property
FieldDefinition
object
6 properties
BatchSchema
ContainerSchemasList
object
1 property
UnitSummary
object
4 properties
InternalServerError
object
6 properties 5 required
Registry_2
object
A centralized, validated repository for entities and inventory items within an organization. The registry serves as the source of truth for registered items—en…
5 properties
GeneralError
object
5 properties 5 required
OrganizationRef
object
2 properties
RegistryPaginatedList
object
2 properties

Specification

The full machine-readable OpenAPI contract behind this narrative.

Source

benchling-registry-api-openapi.yml Raw ↑

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