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Benchling Container API

A Container is a physical vessel (such as a tube, vial, or cryotube) that holdsbiological or chemical samples in Benchling's inventory system. Containers tracktheir contents (see ContainerContent), quantity, location within storage (viaparentStorage which can be a Box, Plate, or Location), and lifecycle informationincluding expiration and freeze-thaw cycles. Each container has a barcode forphysical identification and conforms to a ContainerSchema that defines its typeand schema fields. Containers support checkout tracking (see CheckoutRecord) andcan be associated with Studies. Also known as "tubes" or "sample containers" inlaboratory contexts.

Benchling Container API is one of 203 APIs that Benchling publishes on the APIs.io network, described by a machine-readable OpenAPI specification.

Tagged areas include Container. The published artifact set on APIs.io includes an OpenAPI specification, API documentation, an API reference, authentication docs, rate-limit docs, and a changelog.

This API exposes 12 operations across 11 paths, and defines 45 schemas. It is described by OpenAPI 3.2.0, at version 2.0.0.

Requests are made against a single base URL, /api/v3.

12 operations 11 paths 45 schemas 3 GET3 PATCH6 POST

Metadata

The identity and technical contract details declared by the specification.

Specification
OpenAPI 3.2.0
API Version
2.0.0
Base URL
https://{tenant}.benchling.com/api/v2
Authentication
HTTP Basic, HTTP Basic, OAuth 2.0
License
Resource Areas
1

Authentication & Security 3

Benchling Container API declares 3 security schemes for authenticating requests. It accepts HTTP basic authentication (basicApiKeyAuth). It accepts HTTP basic authentication (basicClientIdSecretAuth). It supports OAuth 2.0 (oAuth) using the clientCredentials flow. By default, every request must be authenticated.

  • basicApiKeyAuth — Use issued API key for standard access to the API
  • basicClientIdSecretAuth — Auth used as part of client credentials OAuth flow prior to receiving a bearer token.
  • oAuth — OAuth2 Client Credentials flow intended for service access

Paths & Operations 12

Across 11 paths, the API surfaces 12 operations — 3 GET, 3 PATCH, 6 POST. Each is listed below with its method, path, parameters, and response codes.

Container 12

A Container is a physical vessel (such as a tube, vial, or cryotube) that holds biological or chemical samples in Benchling's inventory system. Containers track their contents (se…

POST
/container
Create Container
Container.Create 1 param body → 201400403404429500
GET
/container/items
List Container items
Container.List 23 params → 200400403404429500
GET
/container/{container_id}
Get Container by ID
Container.Get 4 params → 200400403404429500
PATCH
/container/{container_id}
Update Container
Container.Update 2 params body → 200400403404429500
POST
/container/{container_id}:remove-content
Remove content from a container.
Container.RemoveContent 2 params body → 200400403404429500
POST
/container/{container_id}:update-content-concentration
Update the concentration of content in a container.
Container.UpdateContentConcentration 2 params body → 200400403404429500
POST
/container:batch-create
Batch create Container
Container.BatchCreate 1 param body → 201400403404429500
PATCH
/container:batch-update
Batch update Container
Container.BatchUpdate 1 param body → 200400403404429500
POST
/container:bulk-create
Bulk create Container
Container.BulkCreate 1 param body → 202400403404429500
PATCH
/container:bulk-update
Bulk update Container
Container.BulkUpdate 1 param body → 202400403404429500
POST
/container:transfer
Transfer contents from sources into destination containers. Each row specifies a destination container and exactly one source (container or entity), the quantity to transfer, an optional final quanti…
Container.Transfer 1 param body → 202400403404429500
GET
/tasks/container/transfer/{task_id}
Poll async task status
Container.Transfer.Get 2 params → 200400403404429500

Schemas 45

The contract defines 45 schemas that model the data the API accepts and returns. The most detailed are IContainer (20 properties), UpdateContainerInputWithPathParams (13 properties), UpdateContainerInput (12 properties), CreateContainerInput (9 properties). Each schema is shown below with its type and property counts.

FieldValueInput
object
1 property 1 required
TransferInput
object
1 property 1 required
CheckoutRecord
object
Tracks the checkout status of an inventory item such as a Container. When laboratory samples need to be temporarily removed from storage (e.g., for an experime…
5 properties
AnyType
TransferOutput
object
Result of a Container.transfer call: the IDs of the destination containers that were updated.
1 property
GridCoordinates
object
Read model representing a fillable position in a box or plate.
5 properties
UpdateContainerInputWithPathParams
object
13 properties 1 required
DateValue
object
A type that represents date values.
2 properties
IContainer
object
20 properties
BooleanValue
object
A type that represents boolean values.
2 properties
ExperimentalRoleInput
object
3 properties 3 required
SingleTransferInput
object
6 properties 2 required
ProjectRef
object
2 properties
ObjectLinkValue
object
A type that represents links to other objects.
2 properties
CheckoutRecordInput
object
3 properties 1 required
ExperimentalRole
object
Represents the complete experimental designation of a well or container within an assay, combining a primary role (see PrimaryExperimentalRole), replicate grou…
4 properties
ContainerPaginatedList
object
2 properties
SchemaFieldValue
object
Represents a field value on a schematized object, pairing a fieldDefinition (describing the field's type and constraints) with its actual value (a BenchlingVal…
5 properties
InternalServerError
object
6 properties 5 required
DecimalValue
object
A type that represents decimal value as strings.
3 properties
UpdateContainerInput
object
12 properties
AsyncTaskLink
object
2 properties
ArrayValue
object
A type that represents a list of BenchlingValues, used for multi-value cells (e.g. alias columns).
2 properties
ContainerContent
object
Represents a biological or chemical entity stored within a Container or well. Each ContainerContent links an Entity (such as a DNA sequence, protein, or custom…
5 properties
Measurement
object
Represents a quantity with an associated unit of measurement within Benchling's inventory system. Measurements are used throughout inventory to track container…
3 properties
ExpirationInfo
object
Provides expiration tracking for inventory items such as containers and their contents. The expirationDate may be explicitly set on the container or inherited…
3 properties
BulkImport
object
1 property 1 required
MeasurementInput
object
2 properties 2 required
PrincipalRef
object
2 properties
ContainerUpdateContentConcentrationInput
object
2 properties 2 required
DateTimeValue
object
A type that represents datetime values.
2 properties
ContainerSchemaRef
object
2 properties
ContainerRemoveContentInput
object
1 property 1 required
ObjectRef
object
2 properties
CreateContainerInput
object
9 properties 1 required
TextValue
object
A type that represents text (string) values.
2 properties
JsonValue
object
A type that represents JSON values.
2 properties
Container
TextAndUrlValue
object
A type that represents text (string) values with an associated URL.
3 properties
IntegerValue
object
A type that represents integer values.
2 properties
SchemaFieldDefinitionRef
object
2 properties
ObjectLinkListValue
object
A type that represents a list of links to other objects.
2 properties
UnitRef
object
2 properties
GeneralError
object
5 properties 5 required
EntityRef
object
2 properties

Specification

The full machine-readable OpenAPI contract behind this narrative.

Source

benchling-container-api-openapi.yml Raw ↑

Other APIs Benchling publishes across the network.

Benchling AA Sequences API
Benchling Apps API
Benchling Assay Results API
Benchling Assay Runs API
Benchling Audit API
Benchling Authentication API
Benchling Blobs API
Benchling Boxes API
Benchling Codon Usage Tables API
Benchling Connect API
Benchling Containers API
Benchling Custom Entities API
Where this information came from

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